NLP for Bioinformatics : CS704

Fall, 2003

Prof. Gary Geunbae Lee

Announcement

 

Course Information

¡¤         Course syllabus

¡¤         Paper Reading List

 

Presentation Slides from Stanford  (Original slides (color) are available from Stanford BMI214/CS274)

¡¤        Representations and Algorithms for Computational Molecular Biology

¡¤        Pairwise Sequence Alignment using Dynamic Programming

¡¤        Multiple Sequence Alignment

¡¤        RNA Structure Computations

¡¤        Terminologies and Ontologies

¡¤        Natural Language Processing in Biology

¡¤        Microarray Data Analysis : Clustering and Classification Methods (1)

¡¤        Microarray Data Analysis : Clustering and Classification Methods (2)

¡¤        Hidden Markov Models and Multiple Sequence Alignment

¡¤        Genetic Networks

¡¤        Intro to Biopathway (Jeong SeolKyung)

¡¤        Pathway/Genome Database

¡¤        Further Opportunities in Bioinformatics and Computational Biology

Supplementary Slides from Stanford

¡¤        Clarification of logistic regression and tree-based multiple alignment

¡¤        Gene Structure & Gene Finding

¡¤        Structural Alignment

¡¤        Basic Computing with Biological Structures in 3D

¡¤        Comparative Genomics

¡¤        The Protein Folding Problem

¡¤        Evolutionary Trees

¡¤        Protein Structure Prediction

¡¤        Proteomics

¡¤        Microarray Data Analysis

¡¤        Yale_intro2002

 

 


edited by jeongwon cha