Instructions:
  • Type a sentence into the box or choose one example from the list.
  • Choose NER: "GPCR/NER" , "GENIA/NER" or "GENE/NER".
  • Upload your text file or input your text.
  • The recognizer produce the result.
  • Result coloring: GPCR/NER protein / gene / small molecule / cellular process
  • Result coloring: GENIA/NER protein/ DNA/ RNA/ CELL_LINE/ CELL_TYPE
  • Result coloring: GENE/NER: gene

GPCR/NER GENIA/NER GENE/NER

Choose your text file and run:

Input your text and run:

How to use Web Interface

There are two ways to utilties our web site

how to submit your text to our system

  • User can type their text into the textarea

  • User can choose one text at their local computer.

how to get your result

  • For user's convience, different named-entity are distincted by different colors.

  • User can download result in sgml format for futher research

    One example is as follow:

    colors are used to differentiate named-entities

    The sphinogosine-1-phosphate receptor EDG-1 is essential for platelet-derived growth factor -induced cell .

    One example of sgml form output is as follow:

    The <PROTEIN>sphingosine-1-phosphate receptor </PROTEIN> <PROTEIN>EDG-1 </PROTEIN> is essential for <PROTEIN>platelet-derived growth factor </PROTEIN> - induced <CELLUAR PROCESS>cell motility </CELLUAR PROCESS>.

    also we provide a client tool, which can be download a t download

  • snapshot